Rapid communication: Microsatellites isolated from BAC clones containing v-akt1 murine thymoma viral oncogene homolog 1 and bradykinin receptor B2 assigned to sheep chromosome 18 by linkage analysis.

نویسندگان

  • T M Robertson
  • E A Lord
  • B C Glass
  • K G Dodds
  • T E Broad
چکیده

Genus and Species. Ovis aries. Locus. Ovine DNA segment OarTMR1 associated with ovine v-akt1 murine thymoma viral oncogene homolog 1 (AKT1) and ovine DNA segment OB2 associated with ovine bradykinin receptor B2 (BDKRB2). Source and Description of Primers. Primers for AKT1 (GenBank accession no. AF207873) were obtained from Scott Fahrenkrug, USDA-MARC, Clay Center, Nebraska, and were sent to Daniel Vaiman, INRA-Jouy, France, to isolate two positive clones from an ovine BAC library that had an average insert size of 123 kb (Vaiman et al., 1999). The procedure of Munroe et al. (1994) was used to identify microsatellite repeats in these clones and primers were designed for an AC-repeat designated OarTMR1. Primers (OarTMR1 forward: 5′-GCCGCTGGTTCCTCCTCCA-3′ and OarTMR1 reverse: 5′-CAGAGCCCTGCGTCCATCTT CT-3′; GenBank accession no. AF224742) were used to amplify the DNA microsatellite OarTMR1. Primers for BDKRB2 (GenBank accession no. AF207860) were designed and used by Scott Fahrenkrug, USDA-MARC, Clay Center, Nebraska, to isolate the DNA microsatellite OB2 (GenBank accession no. AF207876) from a positive clone from an ovine BAC library with an average insert size of 103 kb (Gill et al., 1999). Primers (OB2 forward: 5′-CTGCCCGATCCTTCTGCTT-3′ and OB2 reverse: 5′-AAAGGGGCAGATTCAGTATCCA-3′) were used to amplify the DNA microsatellite OB2. Method of Detection. Standard PCR conditions were used to amplify both microsatellites, using 33P-labeled reverse primers, Gibco BRL Taq DNA polymerase and buffers (Life Technologies, Grand Island, NY), and 2 mM MgCl2 in a touchdown procedure (Crawford et al., 1995). The PCR products were separated by standard high-voltage electrophoresis in 6% polyacrylamide gels and visualized by autoradiography on Kodak (Rochester, NY) XAR5 x-ray film.

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

منابع مشابه

Introducing crucial protein panel of gastric adenocarcinoma disease

AIM Since interactome analysis of diseases can provide candidate biomarker panel related to the diseases, in this research, protein-protein interaction (PPI) network analysis is used to introduce the involved crucial proteins in Gastric adenocarcinoma (GA). BACKGROUND Gastric adenocarcinoma (GA) is the most common type of stomach cancer. There is no efficient diagnostic molecular method for G...

متن کامل

Tumor Heterogeneity at Protein Level as an Independent Prognostic Factor in Endometrial Cancer1

Intratumor heterogeneity implies heterogeneous protein function, facilitating tumor adaptation which results in therapeutic failure. We hypothesized that tumor heterogeneity at protein level may influence the course of the disease. As a single biopsy might not represent the full biologic complexity of the tumor, we have analyzed immunohistochemically four different cores obtained from each prim...

متن کامل

Mutational screening of RET, HRAS, KRAS, NRAS, BRAF, AKT1, and CTNNB1 in medullary thyroid carcinoma.

BACKGROUND Screening medullary thyroid carcinomas (MTCs) for rearranged during transfection (RET) mutations becomes increasingly important for clinical assessment of the disease. The role of mutations in other genes including RAS (i.e. HRAS, KRAS, and NRAS), v-raf murine sarcoma viral oncogene homolog B1 (BRAF), v-akt murine thymoma viral oncogene homolog 1 (AKT1), and CTNNB1 (β-catenin) is unk...

متن کامل

Absence of significant associations between four AKT1 SNP markers and schizophrenia in the Taiwanese population.

AKT1 (V-akt murine thymoma viral oncogene homolog 1) is a protein kinase isoform of AKT. Five single-nucleotide polymorphisms, rs3803300, rs1130214, rs3730358, rs2498799 and rs2494732, at the genomic region of AKT1 have been reported to be significantly associated with schizophrenia. We tested for the presence of these five single-nucleotide polymorphisms in a Taiwanese population by genotyping...

متن کامل

Coexistence of PIK3CA and other oncogene mutations in lung adenocarcinoma-rationale for comprehensive mutation profiling.

Phosphoinositide-3-kinase catalytic alpha polypeptide (PIK3CA) encodes the p110α subunit of the mitogenic signaling protein phosphoinositide 3-kinase (PI3K). PIK3CA mutations in the helical binding domain and the catalytic subunit of the protein have been associated with tumorigenesis and treatment resistance in various malignancies. Characteristics of patients with PIK3CA-mutant lung adenocarc...

متن کامل

ذخیره در منابع من


  با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

عنوان ژورنال:
  • Journal of animal science

دوره 79 2  شماره 

صفحات  -

تاریخ انتشار 2001